As the battle of Sunnova Station wages on, BoBoiBoy fights to protect his friends from Captain Vargoba.

Adu Du and Probe arrived on Earth and has captured MotoBot. Then Cici Ko, Ochobot, BoBoiBoy and Gopal track MotoBot's location to save him and at the same time they also fought with their old enemies.

Cici Ko and MotoBot have been trapped in space from the Power Sphere Hunter and the pirate minions started to head to Cici Ko's spaceship. BoBoiBoy and Gopal took the opportunity to become a hero by defeating that Power Sphere Hunter.

BoBoiBoy and Gopal having been initiated into TAPOPS, are sent on a mission to a planet called Gurunda.

BoBoiBoy and his friends continue searching for the Power Sphere.

Having returned back to Earth from their mission on the planet Gurunda, BoBoiBoy and friends are suddenly attacked by Captain Separo and his band of Space Pirates, who attempt to steal all the Power Spheres.

BoBoiBoy with his friends departs on the Cici Ko's spaceship to travel to TAPOPS Space Station, but a stowaway causes some problems. The travel might not be so safe after all.

While on the way to the TAPOPS Space Station, BoBoiBoy and the others received a distress signal from the TAPOPS Space Station, only to find that things were not always as they seem.

BoBoiBoy, Fang, and Gopal are sent on a mission to deliver some bags of laundry to a client on a dangerous planet called Dargha'ya, but it looks like someone else is ready to sabotage the mission.

BoBoiBoy, Gopal and Fang are still in Planet Dargha'ya, trying to find the mysterious recipient and complete the mission. However, their mission is in peril when Adu Du has gone insane.

Upon returning to TAPOPS Space Station, Tarung is enraged to find that Koko Ci has hired BoBoiBoy and his friends as TAPOPS agents. With that, Tarung gives them a series of tests to ensure that they are indeed qualified to be TAPOPS agents.

BoBoiBoy, Yaya, Ying and Gopal go to a dangerous planet where their Toughness Test is held. They must defeat Team A and retrieve the Power Sphere hidden there.

A thief named Panto has come to TAPOPS and stole Power- Spheras.

BoBoiBoy and his friends go to Planet Circus to retrieve the stolen Power Spheres and face a great clowndiator, Jugglenaut.

The battle between BoBoiBoy and Jugglenaut continues with the return of an old friend and an old elemental power upgrade.

Admiral Tarung instructs BoBoiBoy and his friends to win the Nova Prix Space Race and get the Power Sphera named TrophyBot.

Admiral Tarung gives BoBoiBoy and his friends a break from TAPOPS work. They come back to Earth and decide to go for a picnic on the next day. Then they find a Power Sphere named LoopBot, having the powers to loop, which Adu Du wanted. BoBoiBoy and his friends must save LoopBot from Adu Du who wanted to do mischieves with his looping power!

The lava rock monster named Roktaroka came to Earth to get revenge from BoBoiBoy for destroying his house.

In pursuit of BellBot, a robot called Accurate Ballistic Arrow Mercenary or A.B.A.M attacks Cattus' village. BoBoiBoy and his friends must travel to Gurunda once again to battle A.B.A.M and save Cattus' friends and family.

BoBoiBoy and his friends were on their way home to the TAPOPS Space Station after successfully completing a mission. However, on their way home they face problems and are forced to seek help on nearby planets. Unexpectedly, they had to deal with alien piracy criminal that were most wanted by TAPOPS.

After returning to the TAPOPS Space Station, a Power Sphere named EmotiBot has manipulated BoBoiBoy's friends with emotion. The situation became more aggravated as Tarung became aggressive due to uncontrollable emotions, not to mention his use of power.

Due to the fact that BoBoiBoy did not succeed in getting information about light elemental power, he and his friends went to Planet Junkberg to seek help from DataBot. However, they have to answer some questions from Jagara so they can get into the Space Archives Ship.

BoBoiBoy and friends must infiltrate the Pirate Colony to retrieve Power Sphera StealthBot in order to save Sunnova Station.

After their narrow escape from Captain Vargoba, BoBoiBoy and friends are entrusted with bringing StealthBot safely back to TAPOPS Space Station.