When a boy that Felicity knew when she was 12-years-old comes to town to act on feelings that he has had for her, she consults someone familiar with stalkers: Ben. She also applies for a seminar with a geneticist named Dr. McGrath. Todd gets hit by a bus, and as he arrives at the hospital, he gives Felicity a note she wrote years ago about being an artist. Todd almost dies, which causes Felicity to rethink her career path and blow an interview with Dr. McGrath. Also, Julie mails a tape to Carole, and Elena severs ties with Tara.

When a boy that Felicity knew when she was 12-years-old comes to town to act on feelings that he has had for her, she consults someone familiar with stalkers: Ben. She also applies for a seminar with a geneticist named Dr. McGrath. Todd gets hit by a bus, and as he arrives at the hospital, he gives Felicity a note she wrote years ago about being an artist. Todd almost dies, which causes Felicity to rethink her career path and blow an interview with Dr. McGrath. Also, Julie mails a tape to Carole, and Elena severs ties with Tara.

Ben defends Felicity against a rude customer at Dean & DeLuca. Felicity invites Ben to come over to the apartment to talk. He agrees, but quickly changes his mind and says that he wants to move on. Lauren moves to New York to get away from her ex-boyfriend and make a fresh start. Ben asks her on a date. Javier tries to play matchmaker by separately asking Felicity and Ben to meet him at a play. It proves to be a disaster, as Ben shows up with Lauren. Felicity gives her ticket to Lauren and leaves. Elena tries to convince Felicity to date Owen, a graduate teaching assistant in the art department. Felicity asks her friends to stop meddling in her life. Owen tells Felicity that she seems intense, and suggests that she have a little fun for a change. She asks him out. Lauren's ex-boyfriend calls while she is making out with Ben. Ben decides to leave, but makes another date with her. Ben shows up at the girls' apartment to study with Elena just as Owen arrives to pick up Felic

Felicity worries that Ben is drifting away after she observes his reaction to a sonogram of his son. She has trouble concentrating as she works on a term paper for art history. The thirty-page paper is due the following day, but she has not even picked a topic. Meghan suggests that she just copy a dissertation from the library, and assures her that she could never get caught. Ben agrees to attend Lamaze classes with Lauren in the hopes of convincing her to stay in New York. Felicity becomes very depressed and decides to copy a paper. She fears that she is busted after the professor asks to speak with her. However, Professor Carnes instead tells Felicity that she loves the paper and has submitted it for publication. Meghan advises Felicity to destroy the dissertation and tell the professor that she doesn't want to be published. A library worker catches Felicity trying to throw out the book, but Meghan later cuts a deal with him and steals it. Professor Carnes informs Felicity

Felicity takes in a stray dog, but has trouble finding a place for it to stay. Elena believes that Felicity is using the dog as an excuse to not have sex with David. Lucky is diagnosed with distemper and has to be put to sleep. Felicity sleeps with David. Ben meets Maggie's husband when he comes to Dean & DeLuca to buy food for their anniversary party. Sean continues to fawn over Julie.

Felicity is confused when Ben begins dropping by her apartment frequently. However, he is not ready to get back together. Mrs. Covington is a match for her husband, but he refuses to let her donate part of her liver. Mr. Covington urges Ben to consider forgiving Felicity, as he feels that love is the only thing that really matters. Felicity plans to fly home for Christmas vacation. Another match is found for Mr. Covington. Ben tries to talk to Felicity, but she has already left for the airport. A snowstorm delays her flight, so Ben catches up to her. They enjoy a blissful reunion, and Felicity stays in New York. Unfortunately, the snow prevents the liver for Ben's father from being flown in from Philadelphia. With Mr. Covington unconscious, Ben has power of attorney. He must decide whether to let his mother be a donor. He fears that his father will fall back into his abusive behavior patterns. He talks with Felicity about the need for second chances, and agrees to sign off

After Felicity thinks she spots Blair kissing someone other than Elena, she decides to blow the whistle on him - until she realizes the mystery vixen is Elena's best friend. Meanwhile, Julie learns the identity of her birth mother.

Molly apologizes to Felicity and Ben, but James forbids them from speaking to her. Molly moves back to the apartment after a dazed James pulls a gun on her. James shows up and demands that she leave with him. Ben manages to calm him and convince him to leave. Molly plans to break up with James, and meets him on the street. He talks her into staying with him. Felicity learns that she is still registered for a philosophy class that she thought she had dropped. Meghan never sent in the card to the registrar's office. Felicity must get an A on the final to pass the class. Noel calls on her to help him with an extensive presentation for a web site that is interested in their cartoon. He lashes out at her for her lack of enthusiasm, until Ben explains her plight. In order to help Felicity focus on her final, Noel pretends that he got an extension on the presentation. He helps her cram for the test, as he had worked as a teaching assistant in that class the previous year. Despite her exhausti

When Felicity learns a male called the admissions office requesting a copy of her application essay, she assumes it was Ben — the subject of said essay — and sends him a copy. Meanwhile, Felicity's parents pop up in New York again.

Facing temporary suspension because of his unpaid tuition bill and pressure from his bookie over his gambling debts, Ben frantically sorts through his diminishing options.

After Felicity and Ben are held up, he seems especially spooked and calls on her for late-night chats, one of which includes an invitation to a Halloween party.

Noel tires of hearing about Felicity's goings-on with Ben and forbids her to talk about it with him. Julie and Zack's relationship intensifies. Elena reveals she may be leaving school. Julie's date pushes her too far. Felicity tries to mend fences with Ben. Felicity urges Julie to report the date rape and get counseling, but Julie thinks she caused the incident. Meanwhile, a prospective student visits.

The morning after the fight, Noel confesses he made a "huge mistake" in going off with his ex-girlfriend and begs Felicity for another try at their relationship. Felicity struggles to tell Noel about her own indiscretion.

In the aftermath of their kiss, Felicity gets all hot and bothered about Noel. She continually dreams about him. They team up for the group portion of their final project in art class, and fear that Professor Sherman will not be able to give them an unbiased critique because she hates them. Felicity and Noel spend a lot of time together, and she cannot stop thinking about him. The situation becomes more complicated when Ruby returns from Los Angeles. After much soul searching, Felicity approaches Noel with the suggestion that they get back together. Noel decides that it isn't a good idea; he recalls how badly their first attempt at a relationship ended, and thinks it would be better to commit himself to Ruby. However, Noel and Felicity nearly kiss while working on their assignment, and he begins to re-consider his decision. Ruby must return to Los Angeles for more work on the movie, and gives Noel a ticket so that he can come with her. She suspects that Noel still has feelings f

Greg is in a bind when a doctor leaves the clinic just before it is to undergo an inspection. Felicity volunteers her father for the assignment. She discovers that Dr. Porter is taking anxiety pills, and that he quit his job at the hospital weeks earlier. Dr. Porter explains that he never wanted to take the job in the first place; he misses his wife desperately, and hoped that she would ask him to come home. Noel tells Ruby that he cannot get over the fact that she is carrying someone else's child. He offers his friendship. Tracy annoys Elena with his cockiness as they prepare for an exam. After they both receive outstanding scores, Elena agrees to go out with him. Ben continues to mope about Felicity's close working relationship with Greg. He reluctantly goes on a date, but cannot stop thinking about Felicity. He goes to the clinic to share his feelings. He finds Felicity and Greg talking and laughing as they celebrate the clinic's high marks on the inspection. Dejected, Ben walks awa

After learning of Noel's marriage, Richard organizes an intervention in the hopes of convincing him to leave Natalie. Noel is offended, and orders his friends to stay away from him. Felicity visits his apartment to apologize. She says that it is difficult to deal with how much he has changed, and recalls all his goals for the future. However, she gives her blessing and organizes a party for the couple. Natalie finds one of Richard's fliers about the intervention and storms out. Noel realizes that he must divorce Natalie and resume his life. When Natalie comes home and learns his plans, she punches him in the eye. Sean offers to let Noel move into the loft. Natalie apologizes and agrees to the annulment, but she and Noel end up having sex. Ben's father comes to town, seeking to make amends as part of a twelve-step program. He invites Ben and Felicity to a Yankees game, but never shows up. Julie refuses to answer questions about her father. Elena tells Finn that she doesn't

Felicity lies to Mrs. Emrick about Julie's whereabouts. After finding drugs in Julie's closet, she decides to tell the Emricks the truth. Mrs. Emrick blames Felicity for not looking after her daughter. Overcome with guilt and anxiety, Felicity bombs her midterms. Meghan tries to cheer her up by taking her to a frat party. Meghan and Molly convince Felicity to play strip ping-pong, but then leave her alone. She has too many Jell-O shots and wakes up naked in a frat guy's bed. She cannot remember what happened. Julie calls and says that she is okay. Ben helps Javier study for his citizenship test. Ben does not plan on voting, but changes his mind after Javier lectures him about the privilege of being a citizen. Noel applies for a job with the campus computer center. Tracy tries to help him practice for his tryout by sabotaging his old laptop, unaware that Elena had used it to write her political science paper. Noel must save the day when the arrogant head tech cannot fix the problem. Meg

Javier helps Felicity prepare for the beauty pageant. She befriends an aspiring singer, but has several run-ins with a bitchy contestant named Denise. Felicity asks her friends not to attend the pageant because she doesn't want them to see her in such an embarrassing situation. Noel lands a job as UNY's counselor, where he helps Ben with a registration problem. Felicity takes a pregnancy test, which turns out positive. She doesn't tell anyone but Elena, who recommends she go to the clinic for a blood test. Felicity eventually tells Noel that he might be the father of her child. Elena witnesses the awkwardness between Felicity and Noel and figures out what is going on. Ben sees a receipt for the blood test on Felicity's desk. He discovers that Noel already knew of Felicity's possible pregnancy, and goes to her for some answers. She claims that she was afraid of adding to Ben's problems. She agrees to let him stay and support her during the pageant. Felicity wins the evening

Felicity blames herself for Noel's death because he had survived the fire in the original history. Meghan suggests that she go to Korsikoff and undo the spell. Felicity doubts that this will work, but is willing to try anything. She convinces Korsikoff that she successfully used one of his spells, and follows his request by bringing in personal items from all of her friends. She tells Korsikoff about her friends, her life in New York, and her romantic histories with Ben and Noel. Korsikoff opines that she actually returned to the past to let go of Noel. He burns the items and conducts the spell. Felicity is afraid to go to sleep that night. She wants to undo the damage she caused, but is afraid of losing Ben. Ben pleads with her to try to forgive him in the future, and apologizes in advance. He says that he cannot live without her. Felicity wakes up the night before Noel's wedding, surrounded by concerned friends. They report that she developed a high fever and became delus

After Noel acts on his feelings for Felicity and kisses her during a game of Boggle, the two decide to go on a "maybe date" to discuss the future of their relationship. Julie befriends an aspiring filmmaker.

Felicity receives a marriage proposal from a green-card seeking Javier; and Noel gets a visit from his brother (Eddie McClintock), who shocks him with news that he's gay. Also, Ben takes up swimming.

Noel is confused about his feelings for his ex when they reconnect after a kiss. Also, an art student who admires Felicity's work invites her to the studio; and Julie clashes with Ben's new friends from the swim team.

Noel and Felicity are driven to distraction when Sean, seeking a selling angle for his documentary, latches onto their shattered relationship and pesters them to discuss their feelings on-camera.

Professor Sherman tries to set up Felicity with her son, who is several years older. Julie suggests that it might be a good idea to date a guy without worrying about the prospect of a long-term relationship. David turns out to be a petulant jerk, and Felicity storms out in the middle of dinner. He apologizes and asks for another chance, so she decides to date him. Ben and Maggie start sleeping together. Noel and Elena obsess over a video game.

In a special black and white episode patterned after The Twilight Zone, a mysterious customer offers Felicity advice on how to ease her constant heartache. Felicity visits a clinic, where she soon learns that the doctors use horrific methods to mend a broken heart. Felicity and her friends end up trapped in a small, bare room from which there is no escape. The contents of Meghan's box are revealed (for the purpose of this episode only).