Dr. William Masters, Washington University’s foremost OB/GYN, runs a successful medical practice by day and conducts a secret study of human sexuality by night. Former nightclub singer Virginia Johnson joins the hospital secretarial staff and proves herself to be an asset to Masters’ work.

On the heels of Masters’ proposal that they participate in the sexual response study, Johnson considers the best course of action to keep her job – only to find she no longer has one. The study has been forced out of the hospital and Masters believes Johnson is to blame. As Johnson fights to save her job and struggles to care for her kids, Masters moves his study to a brothel. But Masters soon discovers that the chaos of the cathouse is unmanageable without Johnson’s help.

Masters and Johnson decide that the best way to record their study findings is to film them, but to do so they have to enlist outside help. Johnson redoubles her efforts to get a college degree, only to find that Dr. DePaul’s Basic Anatomy class is a requirement. Meanwhile, Haas and Langham – both unsure in their relationships – convince each other of the merits of being a married man. And after Margaret catches him in a compromising position, Scully takes drastic steps to control his sexual impulses.

Masters and Johnson are interviewed as they take on an exotic new patient.

Masters and Johnson continue their research in the brothel but skewed data confirms that Masters must get the study back into the hospital. At the hospital, Johnson is surprised to learn that a distinguished new doctor on the OB/GYN floor is a woman who has no interest in female solidarity. Meanwhile, Libby struggles to conceive and Dr. Ethan Haas gets the case of a lifetime – a woman pregnant with quadruplets.

Masters and Johnson continue their sexual response study – now as participants – but Johnson fears their work may be interfering with Masters’ home life. Libby pressures Dr. Haas to resume her fertility treatments in secret. Meanwhile, Haas struggles to let go of feelings for Virginia as his relationship with Vivian deepens. And Margaret Scully, caught in her infidelity, confronts her husband on the mounting problems in their marriage.

In the aftermath of the miscarriage, Libby and Masters travel to Miami for some much needed rest and relaxation, but Masters is drawn back into his work by a sexually adventurous couple next door. Alone in the hospital, Virginia enlists Jane in an effort to debunk Freud’s theory that one kind of female orgasm is better than another. And Langham finds an unlikely cure for his sexual dysfunction in Margaret Scully.

The hospital takes part in a nationwide civil defense drill, and the heightened atmosphere escalates conflicts among the staff. A former study participant reveals she’s pregnant and wants to know the identity of the father. Masters and Johnson, their relationship strained after ending their study participation, butt heads on whether to maintain study confidentiality or take responsibility. Haas learns he’s been denied a future job at the hospital but wrongly assumes his breakup with Vivian is to blame. Margaret Scully seeks answers about her husband’s sexuality from an unlikely source.

Masters continues his surrogacy program, now under Johnson's critical eye.

With the study back in the hospital, Masters and Johnson recruit new participants on campus. But Johnson is shocked when her ex-husband George, who’s crashing on her couch, wants to sign up. Masters’ mother comes to visit, but her new take on life stirs up painful memories of his childhood. And Libby’s attempt at playing matchmaker with Virginia and Ethan doesn’t go as smoothly as she’d hoped.

When Masters and Johnson decide to film external reactions in the study, they must convince Lester and Jane that their footage won’t cross the line into pornography. Haas and Vivian’s plans for a Presbyterian church wedding are sidetracked when Haas reveals he’s Jewish. Libby keeps her pregnancy a secret from Masters and instead encourages him to mend his relationship with his mother. But during late night visits to the hospital, Estabrooks observes Masters and Johnson’s intimate relationship.

When Masters and Johnson expand the study to include couples, they discover that the science of sex is easily complicated by the mystery of attraction. Johnson tries to connect with her son who prefers his dad. In anticipation of his baby’s impending arrival, Masters experiences anxiety about becoming a father. And Dr. Ethan Haas learns that dating the provost’s daughter could impact his medical career.

With Johnson no longer on his team, Masters accepts Libby’s offer to help compile the study work for a hospital-wide presentation. But when Masters sees another doctor’s presentation put his colleagues to sleep, he becomes determined to grab their attention even if it means pushing through provoking, but incomplete, research. Dr. DePaul and Johnson travel to a medical convention and DePaul opens up on why her work on the Pap smear is so important. And Virginia’s ex-husband George returns to find Ethan Haas playing father to his children.

Masters takes on a high profile patient. Virginia and Libby come to terms.

Masters and Johnson look to capitalize on their burgeoning fame.

Johnson jets away with Dan Logan. Masters begins his surrogacy program.

Masters and Johnson turn to new partners in an effort to put the past behind them and focus on their expanding clinic. Given their fractured triangle, Libby reevaluates her relationship with Bill and Virginia.

Masters looks to groom Art as his protege in a new area of research as Johnson does her best to keep Nancy at arm's length. Betty seeks an unlikely source for assistance in her fight for equal rights to Helen's baby.

Masters privately treats a couple for infertility, without revealing his relationship to them. Johnson realizes her work with Masters can be used to help people suffering from sexual dysfunction - but quickly gets in over her head when she attempts to treat Barbara Sanderson on her own. Libby is unnerved after witnessing a hate crime that is then whitewashed by the police.

Masters seeks unexpected advice. Virginia is distracted by news of Henry.

In the wake of their fallout, Masters and Johnson search for purpose in a world without one another and look to work as their personal lives crash down around them. Libby finds herself alone for the first time since her marriage and discovers some unexpected allies. Season premiere.

Masters and Johnson adjust to new partners, but their respective cases have them second-guessing the instinct to remain separated. A romantic prospect pushes Libby to embrace life as a newly single woman of the sexual revolution.

Masters begins a new job at Memorial Hospital under Betty's extortion terms only to discover that his boss insists he leave Virginia behind in favor of a handpicked secretary. Meanwhile, Johnson is torn between pressing Masters to rehire her and staying by DePaul's side as her condition worsens.

Masters and Johnson take on a famous couple hoping to renew their sex life.

Johnson objects to Masters' program following missteps in the protocol.