Yukina stalks Kojo as he plays with Yume. A stranger approaches and while chatting her up, half-jokingly accuses her of stalking. He is Gajou, the father of Kojo and Nagisa. Soon after, he leaves the island with Nagisa. On New Year's Eve, Yukina exploits Nagisa's absence to play house with Kojo in his apartment. Motoki arrives with Yume, Kanon, Astarte and Asagi and all visit the temple together. A cryptic message from Nagisa arrives with only a photo of a magic circle in the sky.

Gajou and Nagisa arrive at the temple at Lake Kannawa. He is captured and his jailers are two Lion King miko, Yuiri Haba and Shio Hikawa. Plans for dealing with the sealing relic known as 'Avalon' are discussed. Shirona Kuraki of the Lion Kings will conduct the ritual involving Nagisa, supported by Yuiri. A side-effect of the ritual will permanently expunge the remnant of Avrora from Nagisa.

Strange occurrences at sea result in Itogami Island becoming isolated. Nagisa continues to suffer effects from her previous exertions. A terrorist group known as Tartarus Lapse begins operations on the island.

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Shio defies Azama. From afar, Shirona incapacitates the lower level cultists. Okiyama appears on a wyvern and leading a second one to retrieve Azama and they flee. Azama joins the other confrontation and first betrays Ueyanagi, transforming him into a golem, and then attacking Yuiri, triggering a distraught Glenda to transform and fly off with Yuiri, Kojo and Yukina.

Yukina is sent by the Lion King Organization to the bottom of the Keystone Gate to destroy the kagame stone, the keystone of the entire island, to sink Itogami Island and close the Node portal. While she hesitates to use the Sekkarou to complete her task, Kojo arrives to stop her, determined to fight to defend the island.

Still stuck in Yuuma's body after the mind switch, Kojou rushes to see Yukina and the other girls. At first they're unsure whether to believe him, but after an explanation, Kojou and Yukina try to locate Yuuma in Kojou's body as they draw closer to unraveling the mystery of the witch of the void.

Kojou and Asagi take Sana on board Vatler's boat, the Oceanus Grave II, to protect her from danger. But Kojou's relief is short-lived as he is soon accosted by Vatler's beautiful young maids, and his stimulation is pushed very close to the limit when he ends up sharing a bath with Asagi...

While Asagi investigates, she is interrupted by Lydianne Didier, who reveals that she is working for the Taishikyoku, managing the LYL program and will protect their systems against all comers. She challenges Asagi to hacking combat and begins her attack. Lilith's spirit awakens early and automatically, contrary to Kazuomi's schemes.

The terrorists launch an attack upon the warehouse district. Afterward, Kojo and Himeragi meet the terrorist leader, Senga Takehito, who tries to recruit them. He reveals his beliefs about the true nature of the island, its purpose of reviving Cain, and his plans to oppose this.

Radori Ren tries to show the strength of the Dantou Familiar to Kojo and the others by destroying Tokyo. Meanwhile La Foria who leads the fleet of Knights of the Second Coming attacks Shito (Carena City).

Natsuki magically prevents Kojo from leaving her premises. Kanon recruits Nina to spring him. Outside, Kiriha offers Yukina and him a private jet and false travel documents. Her agency is having fun at the expense of the rival Lion Kings. Asagi continues her efforts to leave the island with Mogwai's aid. Lydianne assists, and later the convict Meiga.

At Mogwai’s urging and with Motoki’s assistance, Asagi makes her way to the Keystone Gate in order to end the hacking attack upon the island’s network. Meanwhile, Kojo and Himeragi battle ineffectively against the demons unleashed by the terrorists.

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The deserted island turns out to be a research facility owned by Magus Craft where Kanon's father, Kensei, conducts research. Kojou and Yukina are attacked by a vanguard force, but the one to save them from danger is Princess La Folia of Aldeigia, a young woman with deep connections to both Kanon and Kojou.

Kiriha Kisaki, who works for the Taishikyoku, an agency similar to and in competition with the Lion Kings, offers to release Sayaka once her mission is complete. Until then Sayaka will be put to work. Kojo discovers that Yume is a succubus demon, and her ostensible sister Riru is actually her own alter ego, concocted to cope with past trauma. The others all rise under her mischievous control and make advances upon Kojo.

After the terrorist incident on Itogami Island, Kojo and the others are helping with the Island's recovery. On the other hand, Asagi, who gained popularity with the public for preventing hacking in the past incident, works as an ambassador for revival activities for the Island Management Corporation. However, Kojo feels like something is off when he sees Asagi on the big screen.

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Kojo enters the Node with Yukina to Stop Shahryar Ren and rescue Avrora.

Kojou and Yukina prepare to ambush Possession Mask, the group responsible for the attacks around Itogami Island... but one of the Possession Mask members they see is Kanase Kanon.