Mibu meets with Tatsuya at a cafe. She thanks him for defusing the brawl between her and Kirihara peacefully. She asks Tatsuya to join their kendo team. He suspects that she has an ulterior motive…

A brother and a sister enroll at the Magic High School. In this school, the students are divided into two distinct groups as "Weeds" and "Blooms." Tatsuya, the brother, has a secret…

Mibu tells Tatsuya that they are planning to let the school know of their thoughts about the discrimination among the students. An open forum is held at the school regarding the treatment of Course 1 and Course 2 students. However, there is an intrusion…

Tatsuya and the others go after the intruders. They are informed that the intruders are in the library, and Mibu is with them. Will they be able to stop them and find out what is going on?

The President of the Student Council invites Miyuki and Tatsuya to lunch. During lunch, she asks Miyuki to join the Student Council. Miyuki says that her brother should also join them. Will he have to prove himself?

Tatsuya has a plan to go after the people from Blance and take them on in battle. He leads the team to an abandoned factory where the people from Blance are. Will they be able to defeat them?

Everyone is surprised at how quick Tatsuya defeated Hattori in the duel. Tatsuya begins his work as part of the Disciplinary Commitee. Meanwhile, Miyuki starts showing more mixed emotions towards her big brother.

During the preparations for the Thesis Competition, a girl is seen carrying a wireless password breaker. Erika offers to teach Leo a move that would be lethal against his enemies. Since they are taking the day off together, rumors start flying about them!

About a month after the parasite incident, Tatsuya and his friends reluctantly bid farewell to Mayumi, Mari, Katsuto and the other seniors at the 29th graduation ceremony at First High School. The time also comes for them to give a send-off to another friend who came from America.

Tatsuya and Miyuki are invited to a party to commemorate the completion of Japan's first hyper-building offshore tower, there Hayama introduces a young girl called Sakurai Minami. The two are shaken upon seeing her face which is that of a woman who died in an incident three years earlier. At such a time, there is intelligence that the party is being targeted by extremist magic advocates — The Advancement of Humanity Front.

Nine Magic University Affiliated High Schools around the country are preparing for the upcoming Nine Schools Competition. The Student Council needs to select engineers. Since Tatsuya knows how to fine-tune CADs, will he take on the role of an engineer?

Nine Schools Competition has finally started, and all eyes are on First High School. Tatsuya learns that the intruders from previous night are with the No-Head Dragons. Will the competition continue without any more interruption?

During Women's Battle Board, Mari Watanabe has an accident and is taken to the Susono Base Hospital. Tatsuya helps her recover with magic. Still, she has to withdraw from Mirage Bat. Tatsuya suspects that the accident wasn't just an accident at all!

Thanks to Tatsuya's engineering skills, First High School players finish on the podium. Third High School students know that the success of First High is due to Tatsuya's skills. What will they do to beat First High School?

Lately, Tatsuya has been reading about creating the Philosopher's Stone, thinking that it might have the capability to store Magic Sequences. Surprisingly, he is asked to participate in the Thesis Competition as a member of the First High School team.

The Thesis Competition is underway and everyone is worried about the security for the event.

Thanks to Pixie's psychic powers, Tatsuya and his friends are finally able to capture the parasites. They leave the scene after Erika and her team arrive, but a third faction disguised as the police appear before them and get in their way.

The entrance ceremony has ended, and club recruitment of the freshmen has begun. Amidst the competitive recruitment frenzy, the Robot Research Club and Motorcycle Club were getting in a heated stare off over a freshman that both clubs were aiming to recruit. Kasumi, from the Disciplinary Committee, and Shippou, from the Extracurricular Activities Federation, intervene. However, now the two who had come to break up the fight begin arguing amongst themselves over who should have authority over the situation, and were on the brink of initiating a physical fight. Meanwhile, Koichi, the head of the Saegusa Family, was devising a plan to mitigate the Yotsuba Family's power through a false anti-magician campaign that the USNA's Humanist Extremist group was drawing up for the media.

Tatsuya and Miyuki visit FLT where a Flying Spell experiment is taking place. They run into members of the Yotsuba family there. Tatsuya sees Mikihiko practicing Spirit Magic. Since Tatsuya seems to be interested, Mikihiko tells him about Crystal Eyes.

The bus that is carrying the students to the Nine Schools Competition is attacked by unknown forces. Tatsuya suspects that it is the work of an insider. At the banquet before the competition, students meet Kudou, the chairman of the Magic Association.

Tatsuya has a feeling that an incident might occur during Mirage Bat. He assures Miyuki that he’ll protect her no matter what. Meanwhile, the No-Head Dragons decide to take even harsher actions to make sure that the Nine Schools Competition is called off.

Tatsuya's computer is hacked. He starts investigating the identity of the attackers and suspects that it has to do with the upcoming Thesis Competition. First High students sense that they are being watched. Will they be able to find out what is going on?

The Yotsuba Family intervenes to eliminate all threats to Tatsuya from the USNA military forces. The only threat that remains are the parasites. After questioning Pixie about the remaining parasites, Tatsuya heads to Aoyama Cemetery with Miyuki and Honoka to lure them out.

The Advancement of Humanity Front have declared they will ‘blow up the offshore tower in one hour’. But there is no guarantee they will keep to their one-hour time limit. For the sake of preventing the Advancement of Humanity Front’s scheme, Tatsuya takes Miyuki and Minami towards the control centre on the first underground floor.

As Tatsuya is researching the Traditionalist bases in Kyoto under Minoru's guidance, he meets the owner of a restaurant, who is also a Traditionalist, on the way to Kiyomizu Temple. The shop owner shares that he is concerned about the current state of Nara's Traditionalist sects being absorbed by casters from the Continent and offers to share information with Tatsuya. Based on the restaurant owner's information, Tatsuya narrows down a place in Kyoto where the Traditionalists are hiding. He meets with Mayumi, who wants to find the culprit who killed Nakura, and Masaki, who happened to come across them during a battle against the Traditionalists, and heads to Arashiyama with them.