The terrorists responsible for the bombing of Grand Central Station finally reveal themselves, but instead of answers, more questions remain. While back at Quantico, the recruits receive a well-deserved few days off for the holidays, but not everyone is oh so merry when secrets are revealed and lines and blurred.

With all the collaborators unveiled, the team uses Clay and Maxine’s engagement party to entice them into one place. The mission: turn one against the others. But everyone’s lives are put at risk when one member of the team makes a surprising decision.

When Clay is forced to use his fiancée to carry out an operation, the whole team reexamines their personal connections, or more accurately, the lack thereof. Meanwhile, Alex forges an unexpected bond with an asset at the center of a conspiracy, and Harry struggles to find his place on the task force.

Alex is on the run and must outsmart Liam and his team to get into her apartment for anything that could help clear her name. Meanwhile, in a flashback to Quantico training, the NATS are tasked with finding a needle in a haystack while looking for potential threats to national security.

It’s graduation day for the NATS of Quantico, while, in the future, Alex and her team find themselves head-to-head with the terrorist.

The new CIA recruits continue training at The Farm focusing on assessment, while in the future, Alex goes undercover to infiltrate the terrorist group holding everyone hostage where she is shocked to discover not everyone is a stranger.

It’s midterm exam time at Quantico where the NATS are given an explosive assignment which results in some people going home for good. In the future, Alex continues to try and clear her name, finding Nimah and Raina who provide more questions than answers leaving Alex and the world to wonder, “who can you really trust?”

At Quantico, an emergency disciplinary hearing causes deep secrets to be spilled, while in the future Alex works covertly with her team to find the real bomber before her time runs out.

The NATS are excited that graduation is near as they prepare to leave Quantico and head out into the real world for their new assignments. In the future, Alex learns someone she cared about at Quantico is not who they seemed to be, as she finds herself at the heart of another possible attack.

While investigating the dark world of espionage at a mysterious CIA training facility, Alex becomes caught at the center of a conspiracy that threatens lives across the globe.

At the Farm, the trainees learn their next task is to decide on a drone strike, which triggers Alex’s memories of Simon’s sacrifice. Meanwhile, Shelby and Leon’s relationship reaches the next level, and Nimah advises Alex and Ryan not to trust Harry. In the future, Alex questions if she can trust Lydia, leading to combat between the two.

At Quantico, the NATS attend a class with guest speaker Dr. Susan Langdon. Dr. Langdon is a former agent and profiler who tasks the trainees with looking at serial killer cases to find the one victim that doesn’t fit the case, but when Simon becomes too good at finding things that don’t belong, it’s his life that becomes endangered. In the future, Alex is interrogated by a highly sophisticated FBI team while Ryan’s life hangs in the balance

Alex finds herself in the middle of a congressional hearing to testify about the terrorist bombings. Convinced Elias didn’t act alone, she is determined to find answers and the truth. While back at Quantico, a new group of NATS join Alex and her classmates, causing tension and competition between the groups of trainees.

At Quantico, the NATS’ current assignment is to learn about human trafficking when Liam and Miranda challenge them to cross the U.S. / Canadian border without passports. Meanwhile, in the future, Simon continues to help Alex try to find the terrorist, but doing so puts his own life in great risk.

The trainees are put through a training drill that tests their stress levels while Alex tries to gather information and get close to Owen. Meanwhile, in the future, the terrorist organization demands a trade, a move that could possibly end the stand-off.

The recruits learn how to burn everything down if they are ever exposed. Meanwhile, a mysterious death leads to an FBI investigation at the Farm. In the future, Alex heads back into the crisis zone and exposes the true traitor within the CIA.

Risking it all, Alex works with Owen to infiltrate the Collaborators. When they begin to test her loyalty, Alex realizes she’s become a pawn in their plan to take down both the President and the task force.

Jocelyn shares her very personal story of hearing loss when she finds herself face-to-face with the adversary responsible for the bomb explosion that changed her life forever. Meanwhile, the team works together to take him down and infiltrates an illegal, underground operation that has deadly consequences when not everyone comes out alive.

In the wake of the G20 hostage crisis, President Claire Haas assembles an illegal and clandestine joint task force, bringing together Alex and her friends from both the FBI and CIA to unmask a global conspiracy.

At Quantico, the NATs look into each other’s background to determine who gets high-level security clearance, and in the process Alex, Shelby and Iris learn some surprising truths about Drew, Will and Caleb. Meanwhile, in the future, Alex contacts Claire Haas (guest star Marcia Cross) in order to find her missing friends and is shocked when she discovers what happened to Cale.

At the Farm, Lydia and Owen teach the group about the necessity of lying and cutting off relationships. Perfect timing for Alex, since she is feeling disconnected from Ryan personally and professionally. In the future, Alex and company attempt to destroy the biological weapon.

At the Farm, Owen teaches the recruits a lesson on the necessity of betrayal, with a mission of getting the Venezuelan Consul Gabriel Carrera to turn on his country. In the future, Alex is forced to team up with Miranda in order to save the hostages, while President Claire Haas has a plan to end the crisis once and for all.

The trainees leave campus for the first time while undergoing their first undercover assignment. With an evening full of unpredictable events, Alex and Ryan find themselves getting close while the recruits’ skills are tested. In the future, Alex decides to tell her side of the story and sits down for her first public interview leaving everyone watching to wonder who is really telling the truth.

In the future, the FBI computer system is hacked and confidential files go public leading Alex to the conclusion that a second bomb is in play somewhere in NYC. Back at Quantico, the recruits are given individual assignments only to realize they are all connected as part of a lesson to look at the bigger picture.

At Quantico, the NATS team up for defensive driving lessons while tensions between Liam and Drew explode, resulting in shocking admissions and consequences. In the future, Simon grapples with his new reality in the aftermath of what’s transpired. Even though his friends try and help him, it’s uncertain he will ever be the same again.