Stardate: Unknown. While boxing on the holodeck, Chakotay is contacted by a telepathic species. However, prolonged communication may leave him insane or braindead.

Stardate: Unknown. After finding a type of dilithium that can survive at a higher temperatures, Tom Paris comes up with the ingenious idea of attempting to cross the transwarp threshold in an attempt to find a way to get home faster.

Stardate: 48921.3. While the crew of Voyager investigate a cluster of space-borne life forms, Kes begins exhibiting strange intense symptoms.

Stardate: 50063.2. Captain Janeway has to undergo a rigorous ritual in order to save Kes' life when she is knocked unconscious.

Stardate: 50732.4. Harry Kim experiences strong senses of deja vu in an unknown region of space. He soon learns that he is native to this region and that he is T'Karian, not human.

Stardate: Unknown. Upon discovering a cultural symbol drawn in the ground on a planet that was used by his ancestors to 'heal the land', Chakotay tries to contact the beings his tribe called the 'Sky Spirits.'

Stardate: Unknown. A near-death experience sends Torres into the apparent Klingon afterlife, and leaves her searching for answers when she returns.

Stardate: Unknown. The inhabitants of the holo-city of Fair Haven suspect the Voyager crew of having mystical powers when they witness the use of their futuristic technology.

Stardate: 50693.2. When the doctor tries to improve his personality by incorporating the psychological profiles of famous and historical people, he is overwhelmed by their dark sides and begins exhibiting signs of a split personality, one the regular doctor, and the other dark and evil. Kes asks to leave Voyager when they encounter a race with vast knowledge of the region of space they are currently exploring.

Stardate: Unknown. An alien woman who requests asylum on board Voyager claims that she was onboard the ship a month ago, and she fell in love with Chakotay.

Stardate: Unknown. While Voyager searches for the crew of the crashed Delta Flyer carrying Tuvok, Paris and Ensign Wildman, Neelix must keep Naomi occupied. When it is discovered that Samantha is badly injured, he must decide how much he should tell her daughter.

Stardate: Unknown. As the crew enjoys time off in a holo-program created by Tom Paris, and set in an Irish village named 'Fair Haven,' Captain Janeway falls for a handsome holo-character specifically designed for her. A deadly neutrino wave approaching Voyager shortly bring the festivities to a halt as this wave may prove to be more dangerous than they first imagined.

Stardate: Unknown. Kes returns to Voyager in a state of rage, blaming Captain Janeway for her past. Using her expanded Ocampan powers in a fit of revenge, she travels through time to deliver the crew to the Vidiians.

Stardate: Unknown. Tom Paris buys a beaten-up old hot-rod of a ship to restore, but B’Ellana begins to worry as Tom grows increasingly obsessed with the ship.

Stardate: 48546.2. Janeway tries to figure out what her dynamic with the crew should be while all stuck in the Delta Quadrant together. Voyager tries to harvest omicron particles to refuel the ship, but inadvertently injures a spacefaring organism.

Stardate: Unknown. Tom Paris and Neelix, while fighting over Kes’s affections, crash-land on a dangerous planet and become responsible for a sickly baby creature.

Stardate: Unknown. Captain Janeway relates the story of her distant ancestor Shannon O'Donnell during the construction of the Millennium Gate on Earth during New Year's Eve 1999. She must convince the last holdout, local bookstore owner Henry Janeway to approve the plan.

Stardate: 49005.3. A young Kazon, desperate to prove himself and earn his name, tries to attack Chakotay.

Stardate: 50074.3. The crew encounter a Bronze Age culture ruled by two “Sages” – a pair of Ferengi who arrived through a wormhole from the Alpha Quadrant.

Stardate: 50348.1. A dying warlord transfers his consciousness to Kes’s body and uses her to stage a bloody coup on his home world.

Stardate: 51658.2. While re-fitting Voyager's systems with newly traded weapons, Seven of Nine claims to have been assaulted by Kovin, the weapons dealer. The Doctor soon makes a surprising discovery about the situation.

Stardate: 51762.4. An alien test pilot who has the capability of switching bodies manages to take Tom's place aboard Voyager in order to escape the law.

Stardate: 54274.7 - Ensign Kim finds himself making the hard choices of mission commander when he agrees to help the crew of a ship in need.

Stardate: Unknown. Tom Paris is accused of a murder he claims he did not commit. His sentence is to re-live the last few moments of his victim's life every 14 hours through a memory transplant.

Stardate: 48734.2. After Chakotay and Tuvok are injured in a shuttle accident, a non-corporeal life form begins to wreak havoc on Voyager by infiltrating the minds of the crew and altering the ship's systems one by one.